1WVR image
Deposition Date 2004-12-24
Release Date 2005-07-05
Last Version Date 2024-10-23
Entry Detail
PDB ID:
1WVR
Keywords:
Title:
Crystal Structure of a CRISP family Ca-channel blocker derived from snake venom
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.28
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 43 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Triflin
Chain IDs:A
Chain Length:221
Number of Molecules:1
Biological Source:Trimeresurus flavoviridis
Ligand Molecules
Primary Citation
Crystal structure of a CRISP family Ca2+ -channel blocker derived from snake venom.
J.Mol.Biol. 350 735 743 (2005)
PMID: 15953617 DOI: 10.1016/j.jmb.2005.05.020

Abstact

The cysteine-rich secretory proteins (CRISPs) are widely distributed in mammals, reptiles, amphibians and secernenteas, and are involved in a variety of biological reactions. Here we report the crystal structure of triflin, a snake venom derived blocker of high K(+)-induced artery contraction, at 2.4A resolution. Triflin consists of two domains. The first 163 residues form a large globular body with an alpha-beta-alpha sandwich core, which resembles pathogenesis-related proteins of group-1 (PR-1). Two glutamic acid-associated histidine residues are located in an elongated cleft. A Cd(2+) resides in this binding site, and forms a five-coordination sphere. The subsequent cysteine-rich domain adopts a rod-like shape, which is stabilized by five disulfide bridges. Hydrophobic residues, which may obstruct the target ion-channel, are exposed to the solvent. A concave surface, which is surrounded by these two domains, is also expected to play a significant role in the binding to the target receptor, leading to ion channel blockage. The C-terminal cysteine-rich region has a similar tertiary structure to voltage-gated potassium channel blocker toxins, such as BgK and ShK. These findings will contribute toward understanding the functions of the widely distributed CRISP family proteins.

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