1WUV image
Deposition Date 2004-12-09
Release Date 2006-04-18
Last Version Date 2023-10-25
Entry Detail
PDB ID:
1WUV
Keywords:
Title:
Crystal structure of native Canavalia gladiata lectin (CGL): a tetrameric ConA-like lectin
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.23
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
C 2 2 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Concanavalin A
Chain IDs:A, B (auth: D), C (auth: G), D (auth: J)
Chain Length:237
Number of Molecules:4
Biological Source:Canavalia gladiata
Primary Citation
Structure of a lectin from Canavalia gladiata seeds: new structural insights for old molecules
Bmc Struct.Biol. 7 52 52 (2007)
PMID: 17683532 DOI: 10.1186/1472-6807-7-52

Abstact

BACKGROUND Lectins are mainly described as simple carbohydrate-binding proteins. Previous studies have tried to identify other binding sites, which possible recognize plant hormones, secondary metabolites, and isolated amino acid residues. We report the crystal structure of a lectin isolated from Canavalia gladiata seeds (CGL), describing a new binding pocket, which may be related to pathogen resistance activity in ConA-like lectins; a site where a non-protein amino-acid, alpha-aminobutyric acid (Abu), is bound. RESULTS The overall structure of native CGL and complexed with alpha-methyl-mannoside and Abu have been refined at 2.3 A and 2.31 A resolution, respectively. Analysis of the electron density maps of the CGL structure shows clearly the presence of Abu, which was confirmed by mass spectrometry. CONCLUSION The presence of Abu in a plant lectin structure strongly indicates the ability of lectins on carrying secondary metabolites. Comparison of the amino acids composing the site with other legume lectins revealed that this site is conserved, providing an evidence of the biological relevance of this site. This new action of lectins strengthens their role in defense mechanisms in plants.

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