1WQ2 image
Deposition Date 2004-09-19
Release Date 2005-09-19
Last Version Date 2023-10-25
Entry Detail
PDB ID:
1WQ2
Title:
Neutron Crystal Structure Of Dissimilatory Sulfite Reductase D (DsrD)
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.28
R-Value Work:
0.22
R-Value Observed:
0.23
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Protein dsvD
Gene (Uniprot):dsvD
Chain IDs:A, B
Chain Length:78
Number of Molecules:2
Biological Source:Desulfovibrio vulgaris
Primary Citation
Crystallization and preliminary neutron analysis of the dissimilatory sulfite reductase D (DsrD) protein from the sulfate-reducing bacterium Desulfovibrio vulgaris.
Acta Crystallogr.,Sect.D 59 2306 2309 (2003)
PMID: 14646103 DOI: 10.1107/S0907444903020596

Abstact

Dissimilatory sulfite reductase D (DsrD) from Desulfovibrio vulgaris has been crystallized for a neutron diffraction study. The initial crystals obtained were too small for the neutron experiment. In order to obtain a larger crystal (>1 mm3), a combination of two techniques was developed to determine the optimum crystallization conditions: a crystallization phase diagram was obtained, followed by crystal-quality assessment via X-ray diffraction. Using conditions determined in this manner, a large single crystal (1.7 mm3) of DsrD protein was subsequently grown in D(2)O solution by the macroseeding technique. A neutron diffraction experiment was carried out using the BIX-3 diffractometer at the Japan Atomic Energy Research Institute (JAERI), collecting data to 2.4 A resolution from an optimized crystal.

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Primary Citation of related structures
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