1W66 image
Deposition Date 2004-08-13
Release Date 2005-12-08
Last Version Date 2024-11-13
Entry Detail
PDB ID:
1W66
Keywords:
Title:
Structure of a lipoate-protein ligase b from Mycobacterium tuberculosis
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.08 Å
R-Value Free:
0.14
R-Value Observed:
0.11
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:LIPOYLTRANSFERASE
Chain IDs:A
Chain Length:232
Number of Molecules:1
Biological Source:MYCOBACTERIUM TUBERCULOSIS
Ligand Molecules
Primary Citation
The Mycobacterium Tuberculosis Lipb Enzyme Functions as a Cysteine/Lysine Dyad Acyltransferase.
Proc.Natl.Acad.Sci.USA 103 8662 ? (2006)
PMID: 16735476 DOI: 10.1073/PNAS.0510436103

Abstact

Lipoic acid is essential for the activation of a number of protein complexes involved in key metabolic processes. Growth of Mycobacterium tuberculosis relies on a pathway in which the lipoate attachment group is synthesized from an endogenously produced octanoic acid moiety. In patients with multiple-drug-resistant M. tuberculosis, expression of one gene from this pathway, lipB, encoding for octanoyl-[acyl carrier protein]-protein acyltransferase is considerably up-regulated, thus making it a potential target in the search for novel antiinfectives against tuberculosis. Here we present the crystal structure of the M. tuberculosis LipB protein at atomic resolution, showing an unexpected thioether-linked active-site complex with decanoic acid. We provide evidence that the transferase functions as a cysteine/lysine dyad acyltransferase, in which two invariant residues (Lys-142 and Cys-176) are likely to function as acid/base catalysts. Analysis by MS reveals that the LipB catalytic reaction proceeds by means of an internal thioesteracyl intermediate. Structural comparison of LipB with lipoate protein ligase A indicates that, despite conserved structural and sequence active-site features in the two enzymes, 4'-phosphopantetheine-bound octanoic acid recognition is a specific property of LipB.

Legend

Protein

Chemical

Disease

Primary Citation of related structures