1W4R image
Deposition Date 2004-07-27
Release Date 2005-02-01
Last Version Date 2025-10-01
Entry Detail
PDB ID:
1W4R
Keywords:
Title:
Structure of a type II thymidine kinase with bound dTTP
Biological Source:
Source Organism:
HOMO SAPIENS (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.83 Å
R-Value Free:
0.18
R-Value Work:
0.15
R-Value Observed:
0.16
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:THYMIDINE KINASE
Gene (Uniprot):TK1
Chain IDs:A, B, C, D, E, F, G, H
Chain Length:195
Number of Molecules:8
Biological Source:HOMO SAPIENS
Primary Citation
Structure of a Type II Thymidine Kinase with Bound Dttp
FEBS Lett. 579 1376 ? (2005)
PMID: 15733844 DOI: 10.1016/J.FEBSLET.2005.01.034

Abstact

The structure of human cytosolic thymidine kinase in complex with its feedback inhibitor 2'-deoxythymidine-5'-triphosphate was determined. This structure is the first representative of the type II thymidine kinases found in several pathogens. The structure deviates strongly from the known structures of type I thymidine kinases such as the Herpes simplex enzyme. It contains a zinc-binding domain with four cysteines complexing a structural zinc ion. Interestingly, the backbone atoms of the type II enzyme bind thymine via hydrogen-bonds, in contrast to type I, where side chains are involved. This results in a specificity difference exploited for antiviral therapy. The presented structure will foster the development of new drugs and prodrugs for numerous therapeutic applications.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
Feedback Form
Name
Email
Institute
Feedback