ISDA

Deposition Date 2004-05-27

Release Date 2005-01-21

Last Version Date 2023-12-13

Entry Detail

PDB ID:

1W0Y

Keywords:

HYDROLASE

Title:

tf7a_3771 complex

Biological Source:

Source Organism:

HOMO SAPIENS (Taxon ID: 9606)

Host Organism:

CRICETULUS GRISEUS

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.50 Å

R-Value Free:

0.25

R-Value Work:

0.19

Space Group:

P 21 21 21

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:BLOOD COAGULATION FACTOR VIIA
Gene (Uniprot):F7
Chain IDs:A (auth: H)
Chain Length:254
Number of Molecules:1
Biological Source:HOMO SAPIENS

UniProt ID:P08709 Pfam ID:PF00089, PF00594, PF00008, PF14670 EC:3.4.21.21

Protein Blast

Polymer Type:polypeptide(L)
Molecule:BLOOD COAGULATION FACTOR VIIA
Gene (Uniprot):F7
Chain IDs:B (auth: L)
Chain Length:142
Number of Molecules:1
Biological Source:HOMO SAPIENS

UniProt ID:P08709 Pfam ID:PF00089, PF00594, PF00008, PF14670 EC:3.4.21.21

Protein Blast

Polymer Type:polypeptide(L)
Molecule:TISSUE FACTOR
Gene (Uniprot):F3
Chain IDs:C (auth: T)
Chain Length:210
Number of Molecules:1
Biological Source:HOMO SAPIENS

UniProt ID:P13726 Pfam ID:PF01108, PF09294

Modified Residue

Compound ID	Chain ID	Parent Comp ID	Details	2D Image
CGU	B	GLU	GAMMA-CARBOXY-GLUTAMIC ACID
SER	B	SER	GLYCOSYLATION SITE

Ligand Molecules

771

BGC

CAC

FUC

Primary Citation

Design of Selective Phenylglycine Amide Tissue Factor/Factor Viia Inhibitors

Groebke-Zbinden, K, Banner, D.W, Ackermann, J, D'Arcy, A, Kirchhofer, D, Ji, Y.-H, Tschopp, T.B, Wallbaum, S, Weber, L, Banner, D.W, D'Arcy, A, Chene, C, Winkler, F.K, Guha, A, Konigsberg, W.H, Nemerson, Y, Kirchhofer, D.Show

Bioorg.Med.Chem.Lett. 15 817 ? (2005)

PMID: 15664864 DOI: 10.1016/J.BMCL.2004.10.092

Abstact

Proof of concept experiments have shown that tissue factor/factor VIIa inhibitors have antithrombotic activity without enhancing bleeding propensity. Starting from lead compounds generated by a biased combinatorial approach, phenylglycine amide tissue factor/factor VIIa inhibitors with low nanomolar affinity and good selectivity against other serine proteases of the coagulation cascade were designed, using the guidance of X-ray structural analysis and molecular modelling.

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Protein

Chemical

Disease

Primary Citation of related structures