1V7C image
Entry Detail
PDB ID:
1V7C
Keywords:
Title:
Crystal structure of threonine synthase from thermus thermophilus hb8 in complex with a substrate analogue
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2003-12-16
Release Date:
2003-12-30
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.23
R-Value Work:
0.19
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:THREONINE SYNTHASE
Chain IDs:A, B, C, D
Chain Length:351
Number of Molecules:4
Biological Source:Thermus thermophilus
Ligand Molecules
Primary Citation
Crystal structures of threonine synthase from Thermus thermophilus HB8: conformational change, substrate recognition, and mechanism.
J.Biol.Chem. 278 46035 46045 (2003)
PMID: 12952961 DOI: 10.1074/jbc.M308065200

Abstact

Threonine synthase, which is a PLP-dependent enzyme, catalyzes the beta,gamma-replacement reaction of l-homoserine phosphate to yield threonine and inorganic phosphate. The three-dimensional structures of the enzyme from Thermus thermophilus HB8 in its unliganded form and complexed with the substrate analogue 2-amino-5-phosphonopentanoic acid have been determined at 2.15 and 2.0 A resolution, respectively. The complexed form, assigned as an enamine, uncovered the interactions of the cofactor-analogue conjugate with the active site residues. The binding of the substrate analogue induces a large conformational change at the domain level. The small domain rotates by about 25 degrees and approaches the large domain to close the active site. The complicated catalytic process of the enzyme has been elucidated based on the complex structure to reveal the stereochemistry of the reaction and to present the released inorganic phosphate as a possible catalyst to carry a proton to the Cgamma atom of the substrate.

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Primary Citation of related structures