1V29 image
Deposition Date 2003-10-09
Release Date 2004-10-09
Last Version Date 2023-12-27
Entry Detail
PDB ID:
1V29
Keywords:
Title:
Crystal structure of Nitrile hydratase from a thermophile Bacillus smithii
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
I 4 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:nitrile hydratase a chain
Chain IDs:A
Chain Length:220
Number of Molecules:1
Biological Source:Bacillus smithii
Polymer Type:polypeptide(L)
Molecule:nitrile hydratase b chain
Chain IDs:B
Chain Length:229
Number of Molecules:1
Biological Source:Bacillus smithii
Ligand Molecules
Primary Citation
Crystal structure of nitrile hydratase from a thermophilic Bacillus smithii
Biochem.Biophys.Res.Commun. 312 340 345 (2003)
PMID: 14637142 DOI: 10.1016/j.bbrc.2003.10.124

Abstact

The crystal structure of the nitrile hydratase (NHase) from Bacillus smithii SC-J05-1 was determined. Our analysis of the structure shows that some residues that seem to be responsible for substrate recognition are different from those of other NHases. In particular, the Phe52 in the beta subunit of NHase from B. smithii covers the metal center partially like a small lid and narrows the active site cleft. It is well known that the NHase from B. smithii especially prefers aliphatic nitriles for its substrate rather than aromatic ones, and we can now infer that the Phe52 residue may play a key role in the substrate specificity for this enzyme. This finding leads us to suggest that substitution of these residues may alter the substrate specificity of the enzyme.

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Primary Citation of related structures