1V04 image
Deposition Date 2004-03-22
Release Date 2004-04-23
Last Version Date 2024-10-23
Entry Detail
PDB ID:
1V04
Keywords:
Title:
serum paraoxonase by directed evolution
Biological Source:
Source Organism:
HOMO SAPIENS (Taxon ID: 9606)
ORYCTOLAGUS CUNICULUS (Taxon ID: 9986)
MUS MUSCULUS (Taxon ID: 10090)
RATTUS RATTUS (Taxon ID: 10117)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 43 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:SERUM PARAOXONASE/ARYLESTERASE 1
Chain IDs:A
Chain Length:355
Number of Molecules:1
Biological Source:HOMO SAPIENS, ORYCTOLAGUS CUNICULUS, MUS MUSCULUS, RATTUS RATTUS
Primary Citation
Structure and Evolution of the Serum Paraoxonase Family of Detoxifying and Anti-Atherosclerotic Enzymes
Nat.Struct.Mol.Biol. 11 412 ? (2004)
PMID: 15098021 DOI: 10.1038/NSMB767

Abstact

Members of the serum paraoxonase (PON) family have been identified in mammals and other vertebrates, and in invertebrates. PONs exhibit a wide range of physiologically important hydrolytic activities, including drug metabolism and detoxification of nerve agents. PON1 and PON3 reside on high-density lipoprotein (HDL, 'good cholesterol') and are involved in the prevention of atherosclerosis. We describe the first crystal structure of a PON family member, a variant of PON1 obtained by directed evolution, at a resolution of 2.2 A. PON1 is a six-bladed beta-propeller with a unique active site lid that is also involved in HDL binding. The three-dimensional structure and directed evolution studies permit a detailed description of PON1's active site and catalytic mechanism, which are reminiscent of secreted phospholipase A2, and of the routes by which PON family members diverged toward different substrate and reaction selectivities.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
Feedback Form
Name
Email
Institute
Feedback