1UN1 image
Entry Detail
PDB ID:
1UN1
Keywords:
Title:
Xyloglucan endotransglycosylase native structure.
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2003-09-03
Release Date:
2004-03-18
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 63
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:XYLOGLUCAN ENDOTRANSGLYCOSYLASE
Chain IDs:A, B
Chain Length:278
Number of Molecules:2
Biological Source:POPULUS TREMULA
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN A ASN GLYCOSYLATION SITE
Ligand Molecules
Primary Citation
Crystal Structures of a Poplar Xyloglucan Endotransglycosylase Reveal Details of Transglycosylation Acceptor Binding
Plant Cell 16 874 ? (2004)
PMID: 15020748 DOI: 10.1105/TPC.020065

Abstact

Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Thus, XET is a key enzyme in all plant processes that require cell wall remodeling. To provide a basis for detailed structure-function studies, the crystal structure of Populus tremula x tremuloides XET16A (PttXET16A), heterologously expressed in Pichia pastoris, has been determined at 1.8-A resolution. Even though the overall structure of PttXET16A is a curved beta-sandwich similar to other enzymes in the glycoside hydrolase family GH16, parts of its substrate binding cleft are more reminiscent of the distantly related family GH7. In addition, XET has a C-terminal extension that packs against the conserved core, providing an additional beta-strand and a short alpha-helix. The structure of XET in complex with a xyloglucan nonasaccharide, XLLG, reveals a very favorable acceptor binding site, which is a necessary but not sufficient prerequisite for transglycosylation. Biochemical data imply that the enzyme requires sugar residues in both acceptor and donor sites to properly orient the glycosidic bond relative to the catalytic residues.

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Primary Citation of related structures