1UMV image
Deposition Date 2003-08-28
Release Date 2003-09-18
Last Version Date 2024-11-20
Entry Detail
PDB ID:
1UMV
Keywords:
Title:
Crystal structure of an acidic, non-myotoxic phospholipase A2 from the venom of Bothrops jararacussu
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.79 Å
R-Value Free:
0.22
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:HYPOTENSIVE PHOSPHOLIPASE A2
Chain IDs:A (auth: X)
Chain Length:122
Number of Molecules:1
Biological Source:BOTHROPS JARARACUSSU
Ligand Molecules
Primary Citation
Crystal Structure of an Acidic Platelet Aggregation Inhibitor and Hypotensive Phospholipase A(2) in the Monomeric and Dimeric States: Insights Into its Oligomeric State
Biochem.Biophys.Res.Commun. 323 24 ? (2004)
PMID: 15351695 DOI: 10.1016/J.BBRC.2004.08.046

Abstact

Phospholipases A2 belong to the superfamily of proteins which hydrolyzes the sn-2 acyl groups of membrane phospholipids to release arachidonic acid and lysophospholipids. An acidic phospholipase A2 isolated from Bothrops jararacussu snake venom presents a high catalytic, platelet aggregation inhibition and hypotensive activities. This protein was crystallized in two oligomeric states: monomeric and dimeric. The crystal structures were solved at 1.79 and 1.90 angstroms resolution, respectively, for the two states. It was identified a Na+ ion at the center of Ca2+-binding site of the monomeric form. A novel dimeric conformation with the active sites exposed to the solvent was observed. Conformational states of the molecule may be due to the physicochemical conditions used in the crystallization experiments. We suggest dimeric state is one found in vivo.

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