ISDA

Deposition Date 1991-11-05

Release Date 1993-01-15

Last Version Date 2024-02-14

Entry Detail

PDB ID:

1ULB

Keywords:

PENTOSYLTRANSFERASE

Title:

APPLICATION OF CRYSTALLOGRAPHIC AND MODELING METHODS IN THE DESIGN OF PURINE NUCLEOSIDE PHOSPHORYLASE INHIBITORS

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.75 Å

R-Value Observed:

0.20

Space Group:

H 3 2

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:PURINE NUCLEOSIDE PHOSPHORYLASE
Gene (Uniprot):PNP
Chain IDs:A
Chain Length:289
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P00491 Pfam ID:PF01048 EC:2.4.2.1

Ligand Molecules

GUN

SO4

Primary Citation

Application of crystallographic and modeling methods in the design of purine nucleoside phosphorylase inhibitors.

Ealick, S.E, Babu, Y.S, Bugg, C.E, Erion, M.D, Guida, W.C, Montgomery, J.A, Secrist 3rd, J.A, Ealick, S.E, Rule, S.A, Carter, D.C, Greenhough, T.J, Babu, Y.S, Cook, W.J, Habash, J, Helliwell, J.R, Stoeckler, J.D, Parksjunior, R.E, Chen, S.-F, Bugg, C.E, Cook, W.J, Ealick, S.E, Bugg, C.E, Stoeckler, J.D, Parksjunior, R.E.Show

Proc.Natl.Acad.Sci.USA 88 11540 11544 (1991)

PMID: 1763067 DOI: 10.1073/pnas.88.24.11540

Abstact

Competitive inhibitors of the salvage pathway enzyme purine-nucleoside phosphorylase (purine-nucleoside:orthophosphate ribosyltransferase, EC 2.4.2.1) have been designed by using the three-dimensional structure of the enzyme as determined by x-ray crystallography. The process was an iterative one that utilized interactive computer graphics, Monte Carlo-based conformational searching, energy minimization, and x-ray crystallography. The proposed compounds were synthesized and tested by an in vitro assay. Among the compounds designed and synthesized are the most potent competitive inhibitors of purine nucleoside phosphorylase thus far reported.

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Protein

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Primary Citation of related structures