1TYE image
Entry Detail
PDB ID:
1TYE
Keywords:
Title:
Structural basis for allostery in integrins and binding of ligand-mimetic therapeutics to the platelet receptor for fibrinogen
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2004-07-07
Release Date:
2004-10-12
Method Details:
Experimental Method:
Resolution:
2.90 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.26
Space Group:
P 62
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Integrin alpha-IIb
Chain IDs:A, C, E
Chain Length:452
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Integrin beta-3
Chain IDs:B, D, F
Chain Length:440
Number of Molecules:3
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN B ASN GLYCOSYLATION SITE
Primary Citation
Structural basis for allostery in integrins and binding to fibrinogen-mimetic therapeutics
Nature 432 59 67 (2004)
PMID: 15378069 DOI: 10.1038/nature02976

Abstact

Integrins are important adhesion receptors in all Metazoa that transmit conformational change bidirectionally across the membrane. Integrin alpha and beta subunits form a head and two long legs in the ectodomain and span the membrane. Here, we define with crystal structures the atomic basis for allosteric regulation of the conformation and affinity for ligand of the integrin ectodomain, and how fibrinogen-mimetic therapeutics bind to platelet integrin alpha(IIb)beta3. Allostery in the beta3 I domain alters three metal binding sites, associated loops and alpha1- and alpha7-helices. Piston-like displacement of the alpha7-helix causes a 62 degrees reorientation between the beta3 I and hybrid domains. Transmission through the rigidly connected plexin/semaphorin/integrin (PSI) domain in the upper beta3 leg causes a 70 A separation between the knees of the alpha and beta legs. Allostery in the head thus disrupts interaction between the legs in a previously described low-affinity bent integrin conformation, and leg extension positions the high-affinity head far above the cell surface.

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