1TU2 image
Deposition Date 2004-06-24
Release Date 2005-03-01
Last Version Date 2024-05-01
Entry Detail
PDB ID:
1TU2
Title:
THE COMPLEX OF NOSTOC CYTOCHROME F AND PLASTOCYANIN DETERMIN WITH PARAMAGNETIC NMR. BASED ON THE STRUCTURES OF CYTOCHROME F AND PLASTOCYANIN, 10 STRUCTURES
Biological Source:
Source Organism:
Nostoc sp. (Taxon ID: 1168)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
5000
Conformers Submitted:
10
Selection Criteria:
REFER TO PUBLICATION
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Plastocyanin
Gene (Uniprot):petE
Chain IDs:A
Chain Length:105
Number of Molecules:1
Biological Source:Nostoc sp.
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Apocytochrome f
Gene (Uniprot):petA
Chain IDs:B
Chain Length:254
Number of Molecules:1
Biological Source:Nostoc sp.
Primary Citation
Structure of the complex between plastocyanin and cytochrome f from the cyanobacterium Nostoc sp. PCC 7119 as determined by paramagnetic NMR. The balance between electrostatic and hydrophobic interactions within the transient complex determines the relative orientation of the two proteins.
J.Biol.Chem. 280 18908 18915 (2005)
PMID: 15705583 DOI: 10.1074/jbc.M413298200

Abstact

The complex between cytochrome f and plastocyanin from the cyanobacterium Nostoc has been characterized by NMR spectroscopy. The binding constant is 16 mM(-1), and the lifetime of the complex is much less than 10 ms. Intermolecular pseudo-contact shifts observed for the plastocyanin amide nuclei, caused by the heme iron, as well as the chemical-shift perturbation data were used as the sole experimental restraints to determine the orientation of plastocyanin relative to cytochrome f with a precision of 1.3 angstroms. The data show that the hydrophobic patch surrounding tyrosine 1 in cytochrome f docks the hydrophobic patch of plastocyanin. Charge complementarities are found between the rims of the respective recognition sites of cytochrome f and plastocyanin. Significant differences in the relative orientation of both proteins are found between this complex and those previously reported for plants and Phormidium, indicating that electrostatic and hydrophobic interactions are balanced differently in these complexes.

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Primary Citation of related structures
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