1TM6 image
Deposition Date 2004-06-10
Release Date 2004-10-12
Last Version Date 2024-05-22
Entry Detail
PDB ID:
1TM6
Title:
NMR Structure of the Free Zinc Binding C-terminal Domain of SecA
Biological Source:
Source Organism:
Escherichia coli (Taxon ID: 562)
Method Details:
Experimental Method:
Conformers Calculated:
500
Conformers Submitted:
20
Selection Criteria:
structures with acceptable covalent geometry,structures with favorable non-bond energy,structures with the least restraint violations,structures with the lowest energy,target function
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Preprotein translocase secA subunit
Gene (Uniprot):secA
Chain IDs:A
Chain Length:22
Number of Molecules:1
Biological Source:Escherichia coli
Ligand Molecules
Primary Citation
NMR structure of the C-terminal domain of SecA in the free state
Biochim.Biophys.Acta 1702 163 171 (2004)
PMID: 15488768 DOI: 10.1016/j.bbapap.2004.08.012

Abstact

SecA is an integral component of the prokaryotic Sec preprotein secretory translocase system. We report here the solution NMR structure of a fragment corresponding to the C-terminal domain of Escherichia coli SecA. In the presence of Zn2+, the fragment adopts a shortened version of the classic betabetaalpha zinc finger fold. The isolated C-terminal domain shows substantial differences from the X-ray structure of a homologous SecA domain bound to the chaperone-like cofactor SecB. The differences between the structures of the free and bound forms suggest that binding to SecB causes a perturbation of the C-terminal domain's intrinsically favored betabetaalpha fold.

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Primary Citation of related structures