1TCS image
Deposition Date 1994-12-27
Release Date 1995-07-10
Last Version Date 2024-02-14
Entry Detail
PDB ID:
1TCS
Title:
CRYSTAL STRUCTURE OF TRICHOSANTHIN-NADPH COMPLEX AT 1.7 ANGSTROMS RESOLUTION REVEALS ACTIVE-SITE ARCHITECTURE
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Observed:
0.17
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:TRICHOSANTHIN
Chain IDs:A
Chain Length:247
Number of Molecules:1
Biological Source:Trichosanthes kirilowii
Ligand Molecules
Primary Citation
Crystal structure of trichosanthin-NADPH complex at 1.7 A resolution reveals active-site architecture.
Nat.Struct.Biol. 1 695 700 (1994)
PMID: 7634073 DOI: 10.1038/nsb1094-695

Abstact

We describe here the crystal structure of the trichosanthin-NADPH complex determined at a resolution of 1.7 A. The adenine base stacks between Tyr 70 and Tyr 111. Arg 163, Glu 160 and Tyr 70 form hydrogen bonds to N(3), O(3') and, through a water molecule, to N(9) of adenosine, respectively. This is the first high resolution structure of a complex between a ribosome-inactivating protein and a substrate analogue, in which the electron density of the N-glycosidic bond is well defined and the preassociated water, thought to be responsible for hydrolyzing the N-C bond, is also explicitly elucidated.

Legend

Protein

Chemical

Disease

Primary Citation of related structures