1TBH image
Deposition Date 2004-05-20
Release Date 2005-08-16
Last Version Date 2024-02-14
Entry Detail
PDB ID:
1TBH
Keywords:
Title:
H141D mutant of rat liver arginase I
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.29
R-Value Work:
0.26
R-Value Observed:
0.26
Space Group:
P 32
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Arginase 1
Gene (Uniprot):Arg1
Mutagens:H141D
Chain IDs:A, B, C
Chain Length:314
Number of Molecules:3
Biological Source:Rattus norvegicus
Ligand Molecules
Primary Citation
Probing the role of the hyper-reactive histidine residue of arginase.
Arch.Biochem.Biophys. 444 15 26 (2005)
PMID: 16266687 DOI: 10.1016/j.abb.2005.09.009

Abstact

Rat liver arginase (arginase I) is potently inactivated by diethyl pyrocarbonate, with a second-order rate constant of 113M(-1)s(-1) for the inactivation process at pH 7.0, 25 degrees C. Partial protection from inactivation is provided by the product of the reaction, l-ornithine, while nearly complete protection is afforded by the inhibitor pair, l-ornithine and borate. The role of H141 has been probed by mutagenesis, chemical modulation, and X-ray diffraction. The hyper-reactivity of H141 towards diethyl pyrocarbonate can be explained by its proximity to E277. A proton shuttling role for H141 is supported by its conformational mobility observed among the known arginase structures. H141 is proposed to serve as an acid/base catalyst, deprotonating the metal-bridging water molecule to generate the metal-bridging hydroxide nucleophile, and by protonating the amino group of the product to facilitate its departure.

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Chemical

Disease

Primary Citation of related structures
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