1T9E image
Deposition Date 2004-05-16
Release Date 2005-05-03
Last Version Date 2025-03-26
Entry Detail
PDB ID:
1T9E
Title:
NMR solution structure of a disulfide analogue of the cyclic sunflower trypsin inhibitor SFTI-1
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Calculated:
50
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Trypsin inhibitor 1
Gene (Uniprot):sfti1
Mutagens:C3(ABA), C11(ABA)
Chain IDs:A
Chain Length:14
Number of Molecules:1
Biological Source:Helianthus annuus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ABA A ALA ALPHA-AMINOBUTYRIC ACID
Ligand Molecules
Primary Citation
Disulfide bond mutagenesis and the structure and function of the head-to-tail macrocyclic trypsin inhibitor SFTI-1
Biochemistry 44 1145 1153 (2005)
PMID: 15667208 DOI: 10.1021/bi048297r

Abstact

SFTI-1 is a novel 14 amino acid peptide comprised of a circular backbone constrained by three proline residues, a hydrogen-bond network, and a single disulfide bond. It is the smallest and most potent known Bowman-Birk trypsin inhibitor and the only one with a cyclic peptidic backbone. The solution structure of [ABA(3,11)]SFTI-1, a disulfide-deficient analogue of SFTI-1, has been determined by (1)H NMR spectroscopy. The lowest energy structures of native SFTI-1 and [ABA(3,11)]SFTI-1 are similar and superimpose with a root-mean-square deviation over the backbone and heavy atoms of 0.26 +/- 0.09 and 1.10 +/- 0.22 A, respectively. The disulfide bridge in SFTI-1 was found to be a minor determinant for the overall structure, but its removal resulted in a slightly weakened hydrogen-bonding network. To further investigate the role of the disulfide bridge, NMR chemical shifts for the backbone H(alpha) protons of two disulfide-deficient linear analogues of SFTI-1, [ABA(3,11)]SFTI-1[6,5] and [ABA(3,11)]SFTI-1[1,14] were measured. These correspond to analogues of the cleavage product of SFTI-1 and a putative biosynthetic precursor, respectively. In contrast with the cyclic peptide, it was found that the disulfide bridge is essential for maintaining the structure of these open-chain analogues. Overall, the hydrogen-bond network appears to be a crucial determinant of the structure of SFTI-1 analogues.

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Primary Citation of related structures