1T6H image
Deposition Date 2004-05-06
Release Date 2004-10-26
Last Version Date 2025-03-26
Entry Detail
PDB ID:
1T6H
Keywords:
Title:
Crystal Structure T4 Lysozyme incorporating an unnatural amino acid p-iodo-L-phenylalanine at position 153
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.01 Å
R-Value Free:
0.20
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 32 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Lysozyme
Gene (Uniprot):E
Mutations:F153(PIL)
Chain IDs:A
Chain Length:164
Number of Molecules:1
Biological Source:Enterobacteria phage T4
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
PHI A PHE IODO-PHENYLALANINE
Primary Citation
The site-specific incorporation of p-iodo-L-phenylalanine into proteins for structure determination.
Nat.Biotechnol. 22 1297 1301 (2004)
PMID: 15378068 DOI: 10.1038/nbt1013

Abstact

A recently developed method makes it possible to genetically encode unnatural amino acids with diverse physical, chemical or biological properties in Escherichia coli and yeast. We now show that this technology can be used to efficiently and site-specifically incorporate p-iodo-L-phenylalanine (iodoPhe) into proteins in response to an amber TAG codon. The selective introduction of the anomalously scattering iodine atom into proteins should facilitate single-wavelength anomalous dispersion experiments on in-house X-ray sources. To illustrate this, we generated a Phe153 --> iodoPhe mutant of bacteriophage T4 lysozyme and determined its crystal structure using considerably less data than are needed for the equivalent experiment with cysteine and methionine. The iodoPhe residue, although present in the hydrophobic core of the protein, did not perturb the protein structure in any meaningful way. The ability to selectively introduce this and other heavy atom-containing amino acids into proteins should facilitate the structural study of proteins.

Legend

Protein

Chemical

Disease

Primary Citation of related structures