1T6G image
Deposition Date 2004-05-06
Release Date 2004-09-28
Last Version Date 2024-10-16
Entry Detail
PDB ID:
1T6G
Title:
Crystal structure of the Triticum aestivum xylanase inhibitor-I in complex with aspergillus niger xylanase-I
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.19
R-Value Work:
0.15
R-Value Observed:
0.16
Space Group:
P 32
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:xylanase inhibitor
Gene (Uniprot):xiI
Chain IDs:A, B
Chain Length:381
Number of Molecules:2
Biological Source:Triticum aestivum
Polymer Type:polypeptide(L)
Molecule:Endo-1,4-beta-xylanase I
Gene (Uniprot):xynA
Chain IDs:C, D
Chain Length:184
Number of Molecules:2
Biological Source:Aspergillus niger
Ligand Molecules
Primary Citation
Structural basis for inhibition of Aspergillus niger xylanase by triticum aestivum xylanase inhibitor-I
J.Biol.Chem. 279 36022 36028 (2004)
PMID: 15166216 DOI: 10.1074/jbc.M404212200

Abstact

Plants developed a diverse battery of defense mechanisms in response to continual challenges by a broad spectrum of pathogenic microorganisms. Their defense arsenal includes inhibitors of cell wall-degrading enzymes, which hinder a possible invasion and colonization by antagonists. The structure of Triticum aestivum xylanase inhibitor-I (TAXI-I), a first member of potent TAXI-type inhibitors of fungal and bacterial family 11 xylanases, has been determined to 1.7-A resolution. Surprisingly, TAXI-I displays structural homology with the pepsin-like family of aspartic proteases but is proteolytically nonfunctional, because one or more residues of the essential catalytical triad are absent. The structure of the TAXI-I. Aspergillus niger xylanase I complex, at a resolution of 1.8 A, illustrates the ability of tight binding and inhibition with subnanomolar affinity and indicates the importance of the C-terminal end for the differences in xylanase specificity among different TAXI-type inhibitors.

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Primary Citation of related structures