1T69 image
Deposition Date 2004-05-05
Release Date 2004-07-27
Last Version Date 2023-08-23
Entry Detail
PDB ID:
1T69
Keywords:
Title:
Crystal Structure of human HDAC8 complexed with SAHA
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.91 Å
R-Value Free:
0.31
R-Value Work:
0.24
Space Group:
P 31 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Histone deacetylase 8
Gene (Uniprot):HDAC8
Chain IDs:A
Chain Length:377
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Structural Snapshots of Human HDAC8 Provide Insights into the Class I Histone Deacetylases
Structure 12 1325 1334 (2004)
PMID: 15242608 DOI: 10.1016/j.str.2004.04.012

Abstact

Modulation of the acetylation state of histones plays a pivotal role in the regulation of gene expression. Histone deacetylases (HDACs) catalyze the removal of acetyl groups from lysines near the N termini of histones. This reaction promotes the condensation of chromatin, leading to repression of transcription. HDAC deregulation has been linked to several types of cancer, suggesting a potential use for HDAC inhibitors in oncology. Here we describe the first crystal structures of a human HDAC: the structures of human HDAC8 complexed with four structurally diverse hydroxamate inhibitors. This work sheds light on the catalytic mechanism of the HDACs, and on differences in substrate specificity across the HDAC family. The structure also suggests how phosphorylation of Ser39 affects HDAC8 activity.

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