1SVY image
Deposition Date 1998-08-10
Release Date 1999-08-10
Last Version Date 2024-11-13
Entry Detail
PDB ID:
1SVY
Title:
SEVERIN DOMAIN 2, 1.75 ANGSTROM CRYSTAL STRUCTURE
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.75 Å
R-Value Free:
0.24
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:SEVERIN
Gene (Uniprot):sevA
Chain IDs:A
Chain Length:114
Number of Molecules:1
Biological Source:Dictyostelium discoideum
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CSO A CYS S-HYDROXYCYSTEINE
Primary Citation
Mapping the functional surface of domain 2 in the gelsolin superfamily.
Biochemistry 39 5322 5331 (2000)
PMID: 10820002 DOI: 10.1021/bi992364d

Abstact

The crystal structure of the F-actin binding domain 2 of severin, the gelsolin homologue from Dictyostelium discoideum, has been determined by multiple isomorphous replacement and refined to 1.75 A resolution. The structure reveals an alpha-helix-beta-sheet sandwich similar to the domains of gelsolin and villin, and contains two cation-binding sites, as observed in other domain 1 and domain 2 homologues. Comparison of the structures of several gelsolin family domains has identified residues that may mediate F-actin binding in gelsolin domain 2 homologues. To assess the involvement of these residues in F-actin binding, three mutants of human gelsolin domain 2 were assayed for F-actin binding activity and thermodynamic stability. Two of the mutants, RRV168AAA and RLK210AAA, demonstrated a lowered affinity for F-actin, indicating a role for those residues in filament binding. Using both structural and biochemical data, we have constructed a model of the gelsolin domain 1-domain 2-F-actin complex. This model highlights a number of interactions that may serve as positive and negative determinants of filament end- and side-binding.

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Primary Citation of related structures