ISDA

Entry Detail

PDB ID:

1SQO

Keywords:

HYDROLASE

Title:

Substituted 2-Naphthamidine Inhibitors of Urokinase

Biological Source:

Source Organism:

Homo sapiens

Host Organism:

Spodoptera frugiperda

PDB Version:

Deposition Date:

2004-03-19

Release Date:

2004-04-27

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.84 Å

R-Value Free:

0.28

R-Value Work:

0.22

R-Value Observed:

0.22

Space Group:

P 21 21 21

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Description:Urokinase-type plasminogen activator
Chain IDs:A
Chain Length:245
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P00749 Pfam ID:PF00089 EC:3.4.21.73

Ligand Molecules

SO4

UI2

Primary Citation

Interaction with the S1beta-pocket of urokinase: 8-heterocycle substituted and 6,8-disubstituted 2-naphthamidine urokinase inhibitors.

Wendt, M.D, Geyer, A, McClellan, W.J, Rockway, T.W, Weitzberg, M, Zhao, X, Mantei, R, Stewart, K, Nienaber, V, Klinghofer, V, Giranda, V.L.Show

Bioorg.Med.Chem.Lett. 14 3063 3068 (2004)

PMID: 15149645

Abstact

Several 8-substituted 2-naphthamidine-based inhibitors of the serine protease urokinase plasminogen activator (uPA) are described. Direct attachment of five-membered saturated or unsaturated rings improved inhibitor performance; substitution with sulfones further improved binding profiles. Combination of these substituents or of previously described NH-linked heteroaromatic rings with 6-phenyl amide substituents provided further enhancements to potency and selectivity.

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Protein

Chemical

Disease

Primary Citation of related structures