1SNG image
Deposition Date 2004-03-10
Release Date 2004-12-14
Last Version Date 2024-10-09
Entry Detail
PDB ID:
1SNG
Title:
Structure of a Thermophilic Serpin in the Native State
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.76 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:COG4826: Serine protease inhibitor
Chain IDs:A
Chain Length:370
Number of Molecules:1
Biological Source:Thermobifida fusca
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CAF A CYS S-DIMETHYLARSINOYL-CYSTEINE
Ligand Molecules
Primary Citation
The high resolution crystal structure of a native thermostable serpin reveals the complex mechanism underpinning the stressed to relaxed transition.
J.Biol.Chem. 280 8435 8442 (2005)
PMID: 15590653 DOI: 10.1074/jbc.M410206200

Abstact

Serpins fold into a native metastable state and utilize a complex conformational change to inhibit target proteases. An undesirable result of this conformational flexibility is that most inhibitory serpins are heat sensitive, forming inactive polymers at elevated temperatures. However, the prokaryote serpin, thermopin, from Thermobifida fusca is able to function in a heated environment. We have determined the 1.8 A x-ray crystal structure of thermopin in the native, inhibitory conformation. A structural comparison with the previously determined 1.5 A structure of cleaved thermopin provides detailed insight into the complex mechanism of conformational change in serpins. Flexibility in the shutter region and electrostatic interactions at the top of the A beta-sheet (the breach) involving the C-terminal tail, a unique structural feature of thermopin, are postulated to be important for controlling inhibitory activity and triggering conformational change, respectively, in the native state. Here we have discussed the structural basis of how this serpin reconciles the thermodynamic instability necessary for function with the stability required to withstand elevated temperatures.

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