1SFY image
Deposition Date 2004-02-21
Release Date 2004-08-10
Last Version Date 2023-10-25
Entry Detail
PDB ID:
1SFY
Title:
Crystal structure of recombinant Erythrina corallodandron Lectin
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.55 Å
R-Value Free:
0.20
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Lectin
Chain IDs:A, B, C, D, E, F
Chain Length:239
Number of Molecules:6
Biological Source:Erythrina corallodendron
Peptide-like Molecules
PRD_900004
Primary Citation
Effect of glycosylation on the structure of Erythrina corallodendron lectin.
Proteins 56 821 827 (2004)
PMID: 15281133 DOI: 10.1002/prot.20168

Abstact

The three-dimensional structure of the recombinant form of Erythrina corallodendron lectin, complexed with lactose, has been elucidated by X-ray crystallography at 2.55 A resolution. Comparison of this non-glycosylated structure with that of the native glycosylated lectin reveals that the tertiary and quaternary structures are identical in the two forms, with local changes observed at one of the glycosylation sites (Asn17). These changes take place in such a way that hydrogen bonds with the neighboring protein molecules in rECorL compensate those made by the glycan with the protein in ECorL. Contrary to an earlier report, this study demonstrates that the glycan attached to the lectin does not influence the oligomeric state of the lectin. Identical interactions between the lectin and the non-covalently bound lactose in the two forms indicate, in line with earlier reports, that glycosylation does not affect the carbohydrate specificity of the lectin. The present study, the first of its kind involving a glycosylated protein with a well-defined glycan and the corresponding deglycosylated form, provides insights into the structural aspects of protein glycosylation.

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Primary Citation of related structures