1SFK image
Deposition Date 2004-02-19
Release Date 2004-08-09
Last Version Date 2024-03-13
Entry Detail
PDB ID:
1SFK
Keywords:
Title:
Core (C) protein from West Nile Virus, subtype Kunjin
Biological Source:
Source Organism:
Kunjin virus (Taxon ID: 11078)
Method Details:
Experimental Method:
Resolution:
3.20 Å
R-Value Free:
0.31
R-Value Work:
0.24
R-Value Observed:
0.25
Space Group:
I 41
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Core protein
Chain IDs:A, B, C, D, E, F, G, H
Chain Length:76
Number of Molecules:8
Biological Source:Kunjin virus
Primary Citation
West nile virus core protein; tetramer structure and ribbon formation
Structure 12 1157 1163 (2004)
PMID: 15242592 DOI: 10.1016/j.str.2004.04.024

Abstact

We have determined the crystal structure of the core (C) protein from the Kunjin subtype of West Nile virus (WNV), closely related to the NY99 strain of WNV, currently a major health threat in the U.S. WNV is a member of the Flaviviridae family of enveloped RNA viruses that contains many important human pathogens. The C protein is associated with the RNA genome and forms the internal core which is surrounded by the envelope in the virion. The C protein structure contains four alpha helices and forms dimers that are organized into tetramers. The tetramers form extended filamentous ribbons resembling the stacked alpha helices seen in HEAT protein structures.

Legend

Protein

Chemical

Disease

Primary Citation of related structures