1SA1 image
Deposition Date 2004-02-06
Release Date 2004-03-23
Last Version Date 2023-08-23
Entry Detail
PDB ID:
1SA1
Keywords:
Title:
Tubulin-podophyllotoxin: stathmin-like domain complex
Biological Source:
Source Organism:
Rattus norvegicus (Taxon ID: 10116)
Bos taurus (Taxon ID: 9913)
Method Details:
Experimental Method:
Resolution:
4.20 Å
R-Value Free:
0.25
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 65
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Tubulin alpha chain
Chain IDs:A, C
Chain Length:451
Number of Molecules:2
Biological Source:Bos taurus
Polymer Type:polypeptide(L)
Molecule:Tubulin beta chain
Chain IDs:B, D
Chain Length:445
Number of Molecules:2
Biological Source:Bos taurus
Polymer Type:polypeptide(L)
Molecule:Stathmin 4
Chain IDs:E
Chain Length:142
Number of Molecules:1
Biological Source:Rattus norvegicus
Primary Citation
Insight into tubulin regulation from a complex with colchicine and a stathmin-like domain.
Nature 428 198 202 (2004)
PMID: 15014504 DOI: 10.1038/nature02393

Abstact

Microtubules are cytoskeletal polymers of tubulin involved in many cellular functions. Their dynamic instability is controlled by numerous compounds and proteins, including colchicine and stathmin family proteins. The way in which microtubule instability is regulated at the molecular level has remained elusive, mainly because of the lack of appropriate structural data. Here, we present the structure, at 3.5 A resolution, of tubulin in complex with colchicine and with the stathmin-like domain (SLD) of RB3. It shows the interaction of RB3-SLD with two tubulin heterodimers in a curved complex capped by the SLD amino-terminal domain, which prevents the incorporation of the complexed tubulin into microtubules. A comparison with the structure of tubulin in protofilaments shows changes in the subunits of tubulin as it switches from its straight conformation to a curved one. These changes correlate with the loss of lateral contacts and provide a rationale for the rapid microtubule depolymerization characteristic of dynamic instability. Moreover, the tubulin-colchicine complex sheds light on the mechanism of colchicine's activity: we show that colchicine binds at a location where it prevents curved tubulin from adopting a straight structure, which inhibits assembly.

Legend

Protein

Chemical

Disease

Primary Citation of related structures