1S6R image
Deposition Date 2004-01-27
Release Date 2004-02-24
Last Version Date 2024-10-30
Entry Detail
PDB ID:
1S6R
Keywords:
Title:
908R class c beta-lactamase bound to iodo-acetamido-phenyl boronic acid
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.24 Å
R-Value Free:
0.29
R-Value Observed:
0.22
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:beta-lactamase
Gene (Uniprot):ampC
Chain IDs:A
Chain Length:359
Number of Molecules:1
Biological Source:Enterobacter cloacae
Ligand Molecules
Primary Citation
Crystal structure of Enterobacter cloacae 908R class C beta-lactamase bound to iodo-acetamido-phenyl boronic acid, a transition-state analogue.
Cell.Mol.Life Sci. 60 1764 1773 (2003)
PMID: 14521155 DOI: 10.1007/s00018-003-3189-2

Abstact

The structures of the class C beta-lactamase from Enterobacter cloacae 908R alone and in complex with a boronic acid transition-state analogue were determined by X-ray crystallography at 2.1 and 2.3 A, respectively. The structure of the enzyme resembles those of other class C beta-lactamases. The structure of the complex with the transition-state analogue, iodo-acetamido-phenyl boronic acid, shows that the inhibitor is covalently bound to the active-site serine (Ser64). Binding of the inhibitor within the active site is compared with previously determined structures of complexes with other class C enzymes. The structure of the boronic acid adduct indicates ways to improve the affinity of this class of inhibitors. This structure of 908R class C beta-lactamase in complex with a transition-state analogue provides further insights into the mechanism of action of these hydrolases.

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Primary Citation of related structures