1S03 image
Deposition Date 2003-12-29
Release Date 2004-05-25
Last Version Date 2023-08-23
Entry Detail
PDB ID:
1S03
Title:
The Structure of a Ribosomal Protein S8/spc Operon mRNA Complex
Biological Source:
Source Organism:
(Taxon ID: )Escherichia coli (Taxon ID: 562)
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.27
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 32 2 1
Macromolecular Entities
Polymer Type:polyribonucleotide
Molecule:47-MER
Chain IDs:A, B
Chain Length:47
Number of Molecules:2
Biological Source:
Polymer Type:polypeptide(L)
Molecule:30S ribosomal protein S8
Gene (Uniprot):rpsH
Chain IDs:C (auth: H), D (auth: G)
Chain Length:129
Number of Molecules:2
Biological Source:Escherichia coli
Ligand Molecules
Primary Citation
The structure of a ribosomal protein S8/spc operon mRNA complex.
RNA 10 954 964 (2004)
PMID: 15146079 DOI: 10.1261/rna.7030704

Abstact

In bacteria, translation of all the ribosomal protein cistrons in the spc operon mRNA is repressed by the binding of the product of one of them, S8, to an internal sequence at the 5' end of the L5 cistron. The way in which the first two genes of the spc operon are regulated, retroregulation, is mechanistically distinct from translational repression by S8 of the genes from L5 onward. A 2.8 A resolution crystal structure has been obtained of Escherichia coli S8 bound to this site. Despite sequence differences, the structure of this complex is almost identical to that of the S8/helix 21 complex seen in the small ribosomal subunit, consistent with the hypothesis that autogenous regulation of ribosomal protein synthesis results from conformational similarities between mRNAs and rRNAs. S8 binding must repress the translation of its own mRNA by inhibiting the formation of a ribosomal initiation complex at the start of the L5 cistron.

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Primary Citation of related structures