1RJ2 image
Deposition Date 2003-11-18
Release Date 2004-06-29
Last Version Date 2023-08-23
Entry Detail
PDB ID:
1RJ2
Title:
Crystal structure of the DH/PH fragment of Dbs without bound GTPase
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Method Details:
Experimental Method:
Resolution:
3.00 Å
R-Value Free:
0.29
R-Value Work:
0.23
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Guanine nucleotide exchange factor DBS [Fragment]
Chain IDs:A, B (auth: D), C (auth: G), D (auth: J)
Chain Length:353
Number of Molecules:4
Biological Source:Mus musculus
Primary Citation
Crystal structure of the DH/PH fragment of Dbs without bound GTPase.
Structure 12 1078 1086 (2004)
PMID: 15274927 DOI: 10.1016/j.str.2004.03.021

Abstact

Dbl proteins are guanine nucleotide exchange factors for Rho GTPases, containing adjacent Dbl homology (DH) and pleckstrin homology (PH) domains. This domain architecture is virtually invariant and typically required for full exchange potential. Several structures of DH/PH fragments bound to GTPases implicate the PH domain in nucleotide exchange. To more fully understand the functional linkage between DH and PH domains, we have determined the crystal structure of the DH/PH fragment of Dbs without bound GTPase. This structure is generally similar to previously determined structures of Dbs bound to GTPases albeit with greater apparent mobility between the DH and PH domains. These comparisons suggest that the DH and PH domains of Dbs are spatially primed for binding GTPases and small alterations in intradomain conformations that may be elicited by subtle biological responses, such as altered phosphoinositide levels, are sufficient to enhance exchange by facilitating interactions between the PH domain and GTPases.

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