ISDA

Deposition Date 2003-09-30

Release Date 2004-11-02

Last Version Date 2024-11-20

Entry Detail

PDB ID:

1R33

Keywords:

HYDROLASE

Title:

Golgi alpha-mannosidase II complex with 5-thio-D-mannopyranosylamine

Biological Source:

Source Organism:

Drosophila melanogaster (Taxon ID: 7227)

Host Organism:

Drosophila melanogaster

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.80 Å

R-Value Free:

0.18

R-Value Work:

0.15

R-Value Observed:

0.15

Space Group:

P 21 21 21

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:putative golgi alpha-mannosidase II
Gene (Uniprot):alpha-Man-IIa
Chain IDs:A
Chain Length:1045
Number of Molecules:1
Biological Source:Drosophila melanogaster

UniProt ID:Q24451 Pfam ID:PF01074, PF09261, PF21260, PF07748, PF18230 EC:3.2.1.114

Modified Residue

Compound ID	Chain ID	Parent Comp ID	Details	2D Image
ASN	A	ASN	GLYCOSYLATION SITE

Ligand Molecules

LKA

MPD

NAG

Primary Citation

5-Thio-d-glycopyranosylamines and their amidinium salts as potential transition-state mimics of glycosyl hydrolases: synthesis, enzyme inhibitory activities, X-ray crystallography, and molecular modeling

Kavelekar, L.M, Kuntz, D.A, Xin, W, Johnston, B.D, Svensson, B, Rose, D.R, Pinto, B.M.Show

TETRAHEDRON ASYMMETRY 16 1035 1046 (2005)

DOI: 10.1016/j.tetasy.2005.01.021

Primary Citation of related structures