1R13 image
Deposition Date 2003-09-23
Release Date 2003-11-18
Last Version Date 2024-10-30
Entry Detail
PDB ID:
1R13
Title:
Carbohydrate recognition and neck domains of surfactant protein A (SP-A)
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.24
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 63
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Pulmonary surfactant-associated protein A
Gene (Uniprot):Sftpa1
Mutagens:N187S
Chain IDs:A
Chain Length:148
Number of Molecules:1
Biological Source:Rattus norvegicus
Primary Citation
Crystal structure of trimeric carbohydrate recognition and neck domains of surfactant protein A
J.Biol.Chem. 278 43254 43260 (2003)
PMID: 12913002 DOI: 10.1074/jbc.M305628200

Abstact

Surfactant protein A (SP-A), one of four proteins associated with pulmonary surfactant, binds with high affinity to alveolar phospholipid membranes, positioning the protein at the first line of defense against inhaled pathogens. SP-A exhibits both calcium-dependent carbohydrate binding, a characteristic of the collectin family, and specific interactions with lipid membrane components. The crystal structure of the trimeric carbohydrate recognition domain and neck domain of SP-A was solved to 2.1-A resolution with multiwavelength anomalous dispersion phasing from samarium. Two metal binding sites were identified, one in the highly conserved lectin site and the other 8.5 A away. The interdomain carbohydrate recognition domain-neck angle is significantly less in SP-A than in the homologous collectins, surfactant protein D, and mannose-binding protein. This conformational difference may endow the SP-A trimer with a more extensive hydrophobic surface capable of binding lipophilic membrane components. The appearance of this surface suggests a putative binding region for membrane-derived SP-A ligands such as phosphatidylcholine and lipid A, the endotoxic lipid component of bacterial lipopolysaccharide that mediates the potentially lethal effects of Gram-negative bacterial infection.

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