1QZ5 image
Entry Detail
PDB ID:
1QZ5
Title:
Structure of rabbit actin in complex with kabiramide C
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2003-09-15
Release Date:
2003-11-11
Method Details:
Experimental Method:
Resolution:
1.45 Å
R-Value Free:
0.18
R-Value Work:
0.16
R-Value Observed:
0.17
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Actin, alpha skeletal muscle
Chain IDs:A
Chain Length:375
Number of Molecules:1
Biological Source:Oryctolagus cuniculus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
HIC A HIS 4-METHYL-HISTIDINE
Primary Citation
Trisoxazole macrolide toxins mimic the binding of actin-capping proteins to actin
Nat.Struct.Biol. 10 1058 1063 (2003)
PMID: 14578936 DOI: 10.1038/nsb1006

Abstact

Marine macrolide toxins of trisoxazole family target actin with high affinity and specificity and have promising pharmacological properties. We present X-ray structures of actin in complex with two members of this family, kabiramide C and jaspisamide A, at a resolution of 1.45 and 1.6 A, respectively. The structures reveal the absolute stereochemistry of these toxins and demonstrate that their trisoxazole ring interacts with actin subdomain 1 while the aliphatic side chain is inserted into the hydrophobic cavity between actin subdomains 1 and 3. The binding site is essentially the same as the one occupied by the actin-capping domain of the gelsolin superfamily of proteins. The structural evidence suggests that actin filament severing and capping by these toxins is also analogous to that of gelsolin. Consequently, these macrolides may be viewed as small molecule biomimetics of an entire class of actin-binding proteins.

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Primary Citation of related structures