1QZ0 image
Entry Detail
PDB ID:
1QZ0
Title:
Crystal Structure of the Yersinia Pestis Phosphatase YopH in Complex with a Phosphotyrosyl Mimetic-Containing Hexapeptide
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2003-09-15
Release Date:
2003-11-25
Method Details:
Experimental Method:
Resolution:
1.50 Å
R-Value Free:
0.20
R-Value Work:
0.18
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Protein-tyrosine phosphatase yopH
Mutations:C235R
Chain IDs:A, B
Chain Length:306
Number of Molecules:2
Biological Source:Yersinia pestis
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
FTY C TYR DEOXY-DIFLUOROMETHELENE-PHOSPHOTYROSINE
Peptide-like Molecules
PRD_000275
Primary Citation
High-Resolution Structure of the Yersinia pestis Protein Tyrosine Phosphatase YopH in Complex with a Phosphotyrosyl Mimetic-Containing Hexapeptide
Biochemistry 42 13113 13121 (2003)
PMID: 14609321 DOI: 10.1021/bi030156m

Abstact

Yersinia pestis, the causative agent of bubonic plague, secretes a eukaryotic-like protein tyrosine phosphatase (PTPase) termed Yersinia outer protein H (YopH) that is essential for virulence. We have determined, for the first time, the crystal structure of the YopH PTPase domain in complex with a nonhydrolyzable substrate analogue, the hexapeptide mimetic Ac-DADE-F(2)Pmp-L-NH(2). As anticipated, the mode of ligand binding in the active site is similar to the way in which the corresponding phosphohexapeptide binds to the structurally homologous human PTP1B. Unexpectedly, however, the crystal structure also revealed a second substrate-binding site in YopH that is not present in PTP1B. The mode of binding and structural conformation of the hexapeptide analogue is quite different in the two sites. Although the biological function of the second substrate-binding site remains to be investigated, the structure of a substrate analogue in the active site of Y. pestis YopH opens the door for the structure-based design and optimization of therapeutic countermeasures to combat this potential agent of bioterrorism.

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