1QNI image
Deposition Date 1999-10-15
Release Date 2000-10-13
Last Version Date 2024-05-08
Entry Detail
PDB ID:
1QNI
Keywords:
Title:
Crystal Structure of Nitrous Oxide Reductase from Pseudomonas nautica, at 2.4A Resolution
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 61
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:NITROUS-OXIDE REDUCTASE
Chain IDs:A, B, C, D, E, F
Chain Length:581
Number of Molecules:6
Biological Source:PSEUDOMONAS NAUTICA
Primary Citation
A novel type of catalytic copper cluster in nitrous oxide reductase.
Nat.Struct.Biol. 7 191 195 (2000)
PMID: 10700275 DOI: 10.1038/73288

Abstact

Nitrous oxide (N20) is a greenhouse gas, the third most significant contributor to global warming. As a key process for N20 elimination from the biosphere, N20 reductases catalyze the two-electron reduction of N20 to N2. These 2 x 65 kDa copper enzymes are thought to contain a CuA electron entry site, similar to that of cytochrome c oxidase, and a CuZ catalytic center. The copper anomalous signal was used to solve the crystal structure of N20 reductase from Pseudomonas nautica by multiwavelength anomalous dispersion, to a resolution of 2.4 A. The structure reveals that the CuZ center belongs to a new type of metal cluster, in which four copper ions are liganded by seven histidine residues. N20 binds to this center via a single copper ion. The remaining copper ions might act as an electron reservoir, assuring a fast electron transfer and avoiding the formation of dead-end products.

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