1QMO image
Deposition Date 1999-10-04
Release Date 1999-10-10
Last Version Date 2024-05-08
Entry Detail
PDB ID:
1QMO
Keywords:
Title:
Structure of FRIL, a legume lectin that delays hematopoietic progenitor maturation
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.50 Å
R-Value Free:
0.25
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 65 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:MANNOSE BINDING LECTIN, FRIL
Chain IDs:A, B, C, D
Chain Length:113
Number of Molecules:4
Biological Source:DOLICHOS LAB LAB
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:MANNOSE BINDING LECTIN, FRIL
Chain IDs:E, F, G, H
Chain Length:133
Number of Molecules:4
Biological Source:DOLICHOS LAB LAB
Primary Citation
The Role of Weak Protein-Protein Interactions in Multivalent Lectin-Carbohydrate Binding: Crystal Structure of Cross-Linked Fril
J.Mol.Biol. 299 875 ? (2000)
PMID: 10843844 DOI: 10.1006/JMBI.2000.3785

Abstact

Binding of multivalent glycoconjugates by lectins often leads to the formation of cross-linked complexes. Type I cross-links, which are one-dimensional, are formed by a divalent lectin and a divalent glycoconjugate. Type II cross-links, which are two or three-dimensional, occur when a lectin or glycoconjugate has a valence greater than two. Type II complexes are a source of additional specificity, since homogeneous type II complexes are formed in the presence of mixtures of lectins and glycoconjugates. This additional specificity is thought to become important when a lectin interacts with clusters of glycoconjugates, e.g. as is present on the cell surface. The cryst1al structure of the Glc/Man binding legume lectin FRIL in complex with a trisaccharide provides a molecular snapshot of how weak protein-protein interactions, which are not observed in solution, can become important when a cross-linked complex is formed. In solution, FRIL is a divalent dimer, but in the crystal FRIL forms a tetramer, which allows for the formation of an intricate type II cross-linked complex with the divalent trisaccharide. The dependence on weak protein-protein interactions can ensure that a specific type II cross-linked complex and its associated specificity can occur only under stringent conditions, which explains why lectins are often found forming higher-order oligomers.

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Primary Citation of related structures
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