1QJD image
Deposition Date 1999-06-23
Release Date 1999-11-21
Last Version Date 2024-11-20
Entry Detail
PDB ID:
1QJD
Keywords:
Title:
Flavocytochrome C3 from Shewanella frigidimarina
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.26
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:FLAVOCYTOCHROME C3
Chain IDs:A
Chain Length:571
Number of Molecules:1
Biological Source:SHEWANELLA FRIGIDIMARINA
Primary Citation
Structural and Mechanistic Mapping of a Unique Fumarate Reductase
Nat.Struct.Biol. 6 1108 ? (1999)
PMID: 10581550 DOI: 10.1038/70045

Abstact

The 1.8 A resolution crystal structure of the tetraheme flavocytochrome c3, Fcc3, provides the first mechanistic insight into respiratory fumarate reductases or succinate dehydrogenases. The multi-redox center, three-domain protein shows a 40 A long 'molecular wire' allowing rapid conduction of electrons through a new type of cytochrome domain onto the active site flavin, driving the reduction of fumarate to succinate. In this structure a malate-like molecule is trapped in the enzyme active site. The interactions between this molecule and the enzyme suggest a clear mechanism for fumarate reduction in which the substrate is polarized and twisted, facilitating hydride transfer from the reduced flavin and subsequent proton transfer. The enzyme active site in the oxidized form is completely buried at the interface between the flavin-binding and the clamp domains. Movement of the cytochrome and clamp domains is postulated to allow release of the product.

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