1QHV image
Deposition Date 1999-05-28
Release Date 1999-09-29
Last Version Date 2023-08-16
Entry Detail
PDB ID:
1QHV
Keywords:
Title:
HUMAN ADENOVIRUS SEROTYPE 2 FIBRE HEAD
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.51 Å
R-Value Free:
0.14
R-Value Work:
0.10
Space Group:
P 3 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:PROTEIN (ADENOVIRUS FIBRE)
Chain IDs:A
Chain Length:195
Number of Molecules:1
Biological Source:Human adenovirus 2
Ligand Molecules
Primary Citation
Structure of the human adenovirus serotype 2 fiber head domain at 1.5 A resolution.
Virology 262 333 343 (1999)
PMID: 10502512 DOI: 10.1006/viro.1999.9849

Abstact

Adenovirus binds to its receptor via the head domain of its fiber protein. We have crystallized the adenovirus serotype 2 (subgroup C) receptor binding domain and solved the structure at 1.5 A resolution by the molecular replacement technique using the known adenovirus type 5 head structure. Included in the high-resolution model are 306 water molecules, five alternative side chain conformations, and individual anisotropic temperature factors for each atom. The overall structure of the serotype 2 head is very similar to its serotype 5 homologue, apart from differences in some of the flexible loops. All but subgroup B adenoviruses are believed to use the recently identified protein CAR (Coxsackievirus and adenovirus receptor) as receptor. By comparison of the two structures and sequence alignment of CAR binding and non-CAR binding serotype fiber heads, we discuss possible receptor binding sites and propose a receptor binding site in a crevice between two monomers on the side of the trimer. The structural basis of the extraordinary stability of the fiber head trimer is also discussed.

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Primary Citation of related structures