1QDP image
Deposition Date 1997-10-09
Release Date 1998-01-14
Last Version Date 2024-11-20
Entry Detail
PDB ID:
1QDP
Keywords:
Title:
SOLUTION STRUCTURE OF ROBUSTOXIN, THE LETHAL NEUROTOXIN FROM THE FUNNEL WEB SPIDER ATRAX ROBUSTUS, NMR, 20 STRUCTURES
Biological Source:
Source Organism:
Atrax robustus (Taxon ID: 6903)
Method Details:
Experimental Method:
Conformers Calculated:
50
Conformers Submitted:
20
Selection Criteria:
TOTAL, NOE & DIHEDRAL ENERGY
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:ROBUSTOXIN
Chain IDs:A
Chain Length:42
Number of Molecules:1
Biological Source:Atrax robustus
Ligand Molecules
Primary Citation
Solution structure of robustoxin, the lethal neurotoxin from the funnel-web spider Atrax robustus.
FEBS Lett. 419 191 196 (1997)
PMID: 9428632 DOI: 10.1016/S0014-5793(97)01452-X

Abstact

The solution structure of robustoxin, the lethal neurotoxin from the Sydney funnel-web spider Atrax robustus, has been determined from 2D 1H NMR data. Robustoxin is a polypeptide of 42 residues cross-linked by four disulphide bonds, the connectivities of which were determined from NMR data and trial structure calculations to be 1-15, 8-20, 14-31 and 16-42 (a 1-4/2-6/3-7/5-8 pattern). The structure consists of a small three-stranded, anti-parallel beta-sheet and a series of interlocking gamma-turns at the C-terminus. It also contains a cystine knot, thus placing it in the inhibitor cystine knot motif family of structures, which includes the omega-conotoxins and a number of plant and animal toxins and protease inhibitors. Robustoxin contains three distinct charged patches on its surface, and an extended loop that includes several aromatic and non-polar residues. Both of these structural features may play a role in its binding to the voltage-gated sodium channel.

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Primary Citation of related structures