1QD7 image
Deposition Date 1999-07-09
Release Date 1999-08-31
Last Version Date 2023-08-16
Entry Detail
PDB ID:
1QD7
Keywords:
Title:
PARTIAL MODEL FOR 30S RIBOSOMAL SUBUNIT
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
5.50 Å
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polyribonucleotide
Molecule:CENTRAL FRAGMENT OF 16 S RNA
Chain IDs:A
Chain Length:271
Number of Molecules:1
Biological Source:Thermus thermophilus
Polymer Type:polyribonucleotide
Molecule:END FRAGMENT OF 16 S RNA
Chain IDs:B
Chain Length:88
Number of Molecules:1
Biological Source:Thermus thermophilus
Polymer Type:polypeptide(L)
Molecule:S4 RIBOSOMAL PROTEIN
Gene (Uniprot):rpsD
Chain IDs:C
Chain Length:159
Number of Molecules:1
Biological Source:Thermus thermophilus
Polymer Type:polypeptide(L)
Molecule:S5 RIBOSOMAL PROTEIN
Gene (Uniprot):rpsE
Chain IDs:D
Chain Length:145
Number of Molecules:1
Biological Source:Thermus thermophilus
Polymer Type:polypeptide(L)
Molecule:S6 RIBOSOMAL PROTEIN
Chain IDs:E
Chain Length:97
Number of Molecules:1
Biological Source:Thermus thermophilus
Polymer Type:polypeptide(L)
Molecule:S7 RIBOSOMAL PROTEIN
Gene (Uniprot):rpsG
Chain IDs:F
Chain Length:135
Number of Molecules:1
Biological Source:Thermus thermophilus
Polymer Type:polypeptide(L)
Molecule:S8 RIBOSOMAL PROTEIN
Chain IDs:G
Chain Length:136
Number of Molecules:1
Biological Source:Thermus thermophilus
Polymer Type:polypeptide(L)
Molecule:S15 RIBOSOMAL PROTEIN
Gene (Uniprot):rpsO
Chain IDs:H
Chain Length:85
Number of Molecules:1
Biological Source:Thermus thermophilus
Polymer Type:polypeptide(L)
Molecule:S17 RIBOSOMAL PROTEIN
Gene (Uniprot):rpsQ
Chain IDs:I
Chain Length:89
Number of Molecules:1
Biological Source:Thermus thermophilus
Polymer Type:polypeptide(L)
Molecule:S20 RIBOSOMAL PROTEIN
Chain IDs:J
Chain Length:100
Number of Molecules:1
Biological Source:Thermus thermophilus
Ligand Molecules
Primary Citation

Abstact

The 30S ribosomal subunit binds messenger RNA and the anticodon stem-loop of transfer RNA during protein synthesis. A crystallographic analysis of the structure of the subunit from the bacterium Thermus thermophilus is presented. At a resolution of 5.5 A, the phosphate backbone of the ribosomal RNA is visible, as are the alpha-helices of the ribosomal proteins, enabling double-helical regions of RNA to be identified throughout the subunit, all seven of the small-subunit proteins of known crystal structure to be positioned in the electron density map, and the fold of the entire central domain of the small-subunit ribosomal RNA to be determined.

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Protein

Chemical

Disease

Primary Citation of related structures