1Q56 image
Deposition Date 2003-08-06
Release Date 2004-04-13
Last Version Date 2024-11-20
Entry Detail
PDB ID:
1Q56
Title:
NMR structure of the B0 isoform of the agrin G3 domain in its Ca2+ bound state
Biological Source:
Source Organism:
Gallus gallus (Taxon ID: 9031)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
400
Conformers Submitted:
15
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Agrin
Gene (Uniprot):AGRN
Mutagens:extra GS at N-terminus (residues 1,2) from cloning artifact
Chain IDs:A
Chain Length:195
Number of Molecules:1
Biological Source:Gallus gallus
Ligand Molecules
Primary Citation
Modulation of agrin function by alternative splicing and Ca2+ binding
Structure 12 503 515 (2004)
PMID: 15016366 DOI: 10.1016/j.str.2004.02.001

Abstact

The aggregation of acetylcholine receptors on postsynaptic membranes is a key step in neuromuscular junction development. This process depends on alternatively spliced forms of the proteoglycan agrin with "B-inserts" of 8, 11, or 19 residues in the protein's globular C-terminal domain, G3. Structures of the neural B8 and B11 forms of agrin-G3 were determined by X-ray crystallography. The structure of G3-B0, which lacks inserts, was determined by NMR. The agrin-G3 domain adopts a beta jellyroll fold. The B insert site is flanked by four loops on one edge of the beta sandwich. The loops form a surface that corresponds to a versatile interaction interface in the family of structurally related LNS proteins. NMR and X-ray data indicate that this interaction interface is flexible in agrin-G3 and that flexibility is reduced by Ca(2+) binding. The plasticity of the interaction interface could enable different splice forms of agrin to select between multiple binding partners.

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Primary Citation of related structures