1PYG image
Deposition Date 1992-07-07
Release Date 1994-01-31
Last Version Date 2024-10-30
Entry Detail
PDB ID:
1PYG
Title:
STRUCTURAL BASIS FOR THE ACTIVATION OF GLYCOGEN PHOSPHORYLASE B BY ADENOSINE MONOPHOSPHATE
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.87 Å
R-Value Work:
0.18
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:GLYCOGEN PHOSPHORYLASE B
Gene (Uniprot):PYGM
Chain IDs:A, B, C, D
Chain Length:842
Number of Molecules:4
Biological Source:Oryctolagus cuniculus
Primary Citation

Abstact

The three-dimensional structure of the activated state of glycogen phosphorylase (GP) as induced by adenosine monophosphate (AMP) has been determined from crystals of pyridoxalpyrophosphoryl-GP. The same quaternary changes relative to the inactive conformation as those induced by phosphorylation are induced by AMP, although the two regulatory signals function through different local structural mechanisms. Moreover, previous descriptions of the phosphorylase active state have been extended by demonstrating that, on activation, the amino- and carboxyl-terminal domains of GP rotate apart by 5 degrees, thereby increasing access of substrates to the catalytic site. The structure also reveals previously unobserved interactions with the nucleotide that accounts for the specificity of the nucleotide binding site for AMP in preference to inosine monophosphate.

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Primary Citation of related structures