1PY0 image
Deposition Date 2003-07-07
Release Date 2004-12-07
Last Version Date 2024-10-30
Entry Detail
PDB ID:
1PY0
Title:
Crystal structure of E51C/E54C Psaz from A.faecalis with CLaNP probe
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 65
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Pseudoazurin
Mutations:E51C, E54C
Chain IDs:A
Chain Length:125
Number of Molecules:1
Biological Source:Alcaligenes faecalis
Primary Citation
A caged lanthanide complex as a paramagnetic shift agent for protein NMR.
Chemistry 10 3252 3260 (2004)
PMID: 15224334 DOI: 10.1002/chem.200306019

Abstact

A lanthanide complex, named CLaNP (caged lanthanide NMR probe) has been developed for the characterisation of proteins by paramagnetic NMR spectroscopy. The probe consists of a lanthanide chelated by a derivative of DTPA (diethylenetriaminepentaacetic acid) with two thiol reactive functional groups. The CLaNP molecule is attached to a protein by two engineered, surface-exposed, Cys residues in a bidentate manner. This drastically limits the dynamics of the metal relative to the protein and enables measurements of pseudocontact shifts. NMR spectroscopy experiments on a diamagnetic control and the crystal structure of the probe-protein complex demonstrate that the protein structure is not affected by probe attachment. The probe is able to induce pseudocontact shifts to at least 40 A from the metal and causes residual dipolar couplings due to alignment at a high magnetic field. The molecule exists in several isomeric forms with different paramagnetic tensors; this provides a fast way to obtain long-range distance restraints.

Legend

Protein

Chemical

Disease

Primary Citation of related structures