1PTX image
Deposition Date 1994-09-02
Release Date 1995-01-26
Last Version Date 2024-10-16
Entry Detail
PDB ID:
1PTX
Keywords:
Title:
CRYSTAL STRUCTURE OF TOXIN II FROM THE SCORPION ANDROCTONUS AUSTRALIS HECTOR REFINED AT 1.3 ANGSTROMS RESOLUTION
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.30 Å
R-Value Work:
0.14
R-Value Observed:
0.14
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:SCORPION TOXIN II
Chain IDs:A
Chain Length:64
Number of Molecules:1
Biological Source:Androctonus australis
Primary Citation
Crystal structure of toxin II from the scorpion Androctonus australis Hector refined at 1.3 A resolution.
J.Mol.Biol. 238 88 103 (1994)
PMID: 8145259 DOI: 10.1006/jmbi.1994.1270

Abstact

The crystal structure of toxin II from the scorpion Androctonus australis Hector has been refined at 1.3 A resolution using restrained least-squares methods. The final R-factor is 0.148 for the 13,619 reflections between 7.0 A and 1.3 A resolution with F > 2.5 sigma (F) and the bond length standard deviation from ideality is 0.017 A. Although minor changes have been introduced relative to the model previously refined at 1.8 A resolution, the use of higher-resolution data has allowed the modelling of some discrete disorder. Thus, three residues (including a disulphide bridge) have been built with multiple conformations. Occupancies were refined for the 106 solvent molecules included in the model, nine of them with explicit multiple sites. There is well-defined electron density for some of the protein hydrogen atoms in the final difference Fourier map. A detailed description of the toxin structure is presented, along with a comparison with the high-resolution structure of the related variant-3 scorpion toxin.

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