1PP4 image
Deposition Date 2003-06-16
Release Date 2004-03-02
Last Version Date 2024-10-16
Entry Detail
PDB ID:
1PP4
Keywords:
Title:
The crystal structure of rhamnogalacturonan acetylesterase in space group P3121
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.22
R-Value Work:
0.18
Space Group:
P 31 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Rhamnogalacturonan acetylesterase
Gene (Uniprot):rha1
Chain IDs:A, B
Chain Length:233
Number of Molecules:2
Biological Source:Aspergillus aculeatus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN A ASN GLYCOSYLATION SITE
Ligand Molecules
Primary Citation
Crystal packing in two pH-dependent crystal forms of rhamnogalacturonan acetylesterase.
Acta Crystallogr.,Sect.D 60 472 478 (2004)
PMID: 14993671 DOI: 10.1107/S0907444903029767

Abstact

The glycoprotein rhamnogalacturonan acetylesterase from Aspergillus aculeatus has been crystallized in two crystal forms, an orthorhombic and a trigonal crystal form. In the orthorhombic crystal form, the covalently bound carbohydrate at one of the two N-glycosylation sites is involved in crystal contacts. The orthorhombic crystal form was obtained at pH 5.0 and the trigonal crystal form at pH 4.5. In one case, the two crystal forms were found in the same drop at pH 4.7. The differences in crystal packing in the two crystal forms can be explained by the pH-dependent variation in the protonation state of the glutamic acid residues on the protein surface.

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Primary Citation of related structures