1PO2 image
Deposition Date 1997-01-08
Release Date 1997-12-03
Last Version Date 2024-11-06
Entry Detail
PDB ID:
1PO2
Keywords:
Title:
POLIOVIRUS (TYPE 1, MAHONEY) IN COMPLEX WITH R77975, AN INHIBITOR OF VIRAL REPLICATION
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.90 Å
R-Value Work:
0.24
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:POLIOVIRUS TYPE 1 MAHONEY
Chain IDs:A (auth: 0)
Chain Length:5
Number of Molecules:1
Biological Source:Human poliovirus 1
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:POLIOVIRUS TYPE 1 MAHONEY
Chain IDs:B (auth: 1)
Chain Length:302
Number of Molecules:1
Biological Source:Human poliovirus 1
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:POLIOVIRUS TYPE 1 MAHONEY
Chain IDs:C (auth: 2)
Chain Length:272
Number of Molecules:1
Biological Source:Human poliovirus 1
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:POLIOVIRUS TYPE 1 MAHONEY
Chain IDs:D (auth: 3)
Chain Length:238
Number of Molecules:1
Biological Source:Human poliovirus 1
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:POLIOVIRUS TYPE 1 MAHONEY
Chain IDs:E (auth: 4)
Chain Length:68
Number of Molecules:1
Biological Source:Human poliovirus 1
Primary Citation

Abstact

Crystal structures of the Mahoney strain of type 1 poliovirus complexed with the antiviral compounds R80633 and R77975 were determined at 2.9 A resolution. These compounds block infection by preventing conformational changes required for viral uncoating. In various drug-poliovirus complexes reported earlier, no significant conformational changes were found in the structures of the capsid proteins. In the structures reported here, the strain of virus is relatively insensitive to these antivirals. Correspondingly, significant conformational changes are necessary to accommodate the drug. These conformational changes affect both the immediate vicinity of the drug binding site, and more distant loops located near the fivefold axis. In addition, small but concerted shifts of the centers of mass of the major capsid proteins consistently have been detected whose magnitudes are correlated inversely with the effectiveness of the drugs. Collectively, the drug complexes appear to sample the conformational repertoire of poliovirus near equilibrium, and thus provide a possible model for the earliest stages of viral uncoating during infection.

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Primary Citation of related structures