1PK6 image
Deposition Date 2003-06-05
Release Date 2003-10-21
Last Version Date 2024-10-30
Entry Detail
PDB ID:
1PK6
Keywords:
Title:
Globular Head of the Complement System Protein C1q
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
1.85 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Complement C1q subcomponent, A chain precursor
Gene (Uniprot):C1QA
Chain IDs:A
Chain Length:133
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Complement C1q subcomponent, B chain precursor
Gene (Uniprot):C1QB
Chain IDs:B
Chain Length:132
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Complement C1q subcomponent, C chain precursor
Gene (Uniprot):C1QC
Chain IDs:C
Chain Length:129
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
The crystal structure of the globular head of complement protein C1q provides a basis for its versatile recognition properties.
J.Biol.Chem. 278 46974 46982 (2003)
PMID: 12960167 DOI: 10.1074/jbc.M307764200

Abstact

C1q is a versatile recognition protein that binds to an amazing variety of immune and non-immune ligands and triggers activation of the classical pathway of complement. The crystal structure of the C1q globular domain responsible for its recognition properties has now been solved and refined to 1.9 A of resolution. The structure reveals a compact, almost spherical heterotrimeric assembly held together mainly by non-polar interactions, with a Ca2+ ion bound at the top. The heterotrimeric assembly of the C1q globular domain appears to be a key factor of the versatile recognition properties of this protein. Plausible three-dimensional models of the C1q globular domain in complex with two of its physiological ligands, C-reactive protein and IgG, are proposed, highlighting two of the possible recognition modes of C1q. The C1q/human IgG1 model suggests a critical role for the hinge region of IgG and for the relative orientation of its Fab domain in C1q binding.

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Primary Citation of related structures