1PK5 image
Deposition Date 2003-06-04
Release Date 2003-07-01
Last Version Date 2023-08-16
Entry Detail
PDB ID:
1PK5
Keywords:
Title:
Crystal structure of the orphan nuclear receptor LRH-1
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Orphan nuclear receptor NR5A2
Gene (Uniprot):Nr5a2
Chain IDs:A, B
Chain Length:248
Number of Molecules:2
Biological Source:Mus musculus
Primary Citation
Structural basis for ligand-independent activation of the orphan nuclear receptor LRH-1
Mol.Cell 11 1575 1585 (2003)
PMID: 12820970 DOI: 10.1016/S1097-2765(03)00236-3

Abstact

The orphan nuclear receptors SF-1 and LRH-1 are constitutively active, but it remains uncertain whether their activation is hormone dependent. We report the crystal structure of the LRH-1 ligand binding domain to 2.4 A resolution and find the receptor to be a monomer that adopts an active conformation with a large but empty hydrophobic pocket. Adding bulky side chains into this pocket resulted in full or greater activity suggesting that, while LRH-1 could accommodate potential ligands, these are dispensable for basal activity. Constitutive LRH-1 activity appears to be conferred by a distinct structural element consisting of an extended helix 2 that provides an additional layer to the canonical LBD fold. Mutating the conserved arginine in helix 2 reduced LRH-1 receptor activity and coregulator recruitment, consistent with the partial loss-of-function phenotype exhibited by an analogous SF-1 human mutant. These findings illustrate an alternative structural strategy for nuclear receptor stabilization in the absence of ligand binding.

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