1PK0 image
Deposition Date 2003-06-04
Release Date 2004-02-10
Last Version Date 2024-04-03
Entry Detail
PDB ID:
1PK0
Title:
Crystal Structure of the EF3-CaM complexed with PMEApp
Biological Source:
Source Organism:
Bacillus anthracis (Taxon ID: 1392)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.30 Å
R-Value Free:
0.30
R-Value Work:
0.26
Space Group:
I 2 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Calmodulin-sensitive adenylate cyclase
Gene (Uniprot):cya
Chain IDs:A, B, C
Chain Length:507
Number of Molecules:3
Biological Source:Bacillus anthracis
Polymer Type:polypeptide(L)
Molecule:Calmodulin
Chain IDs:D, E, F
Chain Length:147
Number of Molecules:3
Biological Source:Homo sapiens
Primary Citation
Selective inhibition of anthrax edema factor by adefovir, a drug for chronic hepatitis B virus infection.
Proc.Natl.Acad.Sci.USA 101 3242 3247 (2004)
PMID: 14978283 DOI: 10.1073/pnas.0306552101

Abstact

Edema factor (EF), a key virulence factor in anthrax pathogenesis, has calmodulin (CaM)-activated adenylyl cyclase activity. We have found that adefovir dipivoxil, a drug approved to treat chronic infection of hepatitis B virus, effectively inhibits EF-induced cAMP accumulation and changes in cytokine production in mouse primary macrophages. Adefovir diphosphate (PMEApp), the active cellular metabolite of adefovir dipivoxil, inhibits the adenylyl cyclase activity of EF in vitro with high affinity (K(i) = 27 nM). A crystal structure of EF-CaM-PMEApp reveals that the catalytic site of EF forms better van der Waals contacts and more hydrogen bonds with PMEApp than with its endogenous substrate, ATP, providing an explanation for the approximately 10,000-fold higher affinity EF-CaM has for PMEApp versus ATP. Adefovir dipivoxil is a clinically approved drug that can block the action of an anthrax toxin. It can be used to address the role of EF in anthrax pathogenesis.

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Primary Citation of related structures