1PEY image
Deposition Date 2003-05-22
Release Date 2004-05-18
Last Version Date 2024-02-14
Entry Detail
PDB ID:
1PEY
Keywords:
Title:
Crystal structure of the Response Regulator Spo0F complexed with Mn2+
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.25 Å
R-Value Free:
0.25
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 43 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Sporulation initiation phosphotransferase F
Gene (Uniprot):spo0F
Mutagens:Y13S
Chain IDs:A, B, C
Chain Length:124
Number of Molecules:3
Biological Source:Bacillus subtilis
Ligand Molecules
Primary Citation
Metals in the sporulation phosphorelay: manganese binding by the response regulator Spo0F.
Acta Crystallogr.,Sect.D 60 638 645 (2004)
PMID: 15039551 DOI: 10.1107/S0907444904002148

Abstact

As a part of studies on the structural characterization of the components of the sporulation phosphorelay in Bacillus subtilis, the crystal structure of the manganese derivative of an intermediate signal transducer, Spo0F, has been elucidated at 2.25 A resolution. The calcium complex and the apo structures have been analyzed previously. In apo Spo0F, the active-site cation cavity is only partially formed and it only becomes completed upon metal coordination. The carbonyl of Lys56 is coordinated to the metal and interestingly the side chain of Lys56 exists in a variety of conformations in the three crystal structures of Spo0F. The affinity of the magnesium ion for Spo0F is in fact low; however, it binds Spo0F when it is in complex with Spo0B. It is proposed that the existence of a deep pocket which extends from the surface to the metal site could attract and direct the metal, thereby facilitating the metal binding of the complex.

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Primary Citation of related structures
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